41
Summary
HuGen2071 book
Preface
1
Preparation
2
Introduction
3
Logistics
4
Artificial Intelligence
5
Active Learning and Readings
6
GitHub
7
Git Commands
8
Lecture: R Basics
9
R Basics Group Exercise
10
Lecture: R: factors, subscripting
11
R Factors Exercise
12
R Subsetting Exercise
13
Lecture: R Character Manipulation
14
R Character Exercise
15
Lecture: Loops in R
16
Loops in R, Part I
17
Conditionals in R
18
Loops in R, Part II
19
Functions
20
R Functions Excercise
21
Tidyverse
22
R Tidyverse Exercise
23
R Recoding Reshaping Exercise
24
R Merging Exercise
25
R Graphics Exercises
26
R Reordering Exercise
27
R Exploratory Data Analysis Exercise
28
Interactive Graphics
29
GRanges Exercise
30
Data Cleaning Exercise
31
Questions about R
32
R gotchas
33
Basic Shell Commands
34
Unix Basics
35
Unix Streams, Pipes, Scripts
36
Slurm script settings
37
Unix Data Manipulation
38
Unix Miscellaneous
39
Unix Scripting
40
Genetic Data in R and GDS
41
Summary
References
Appendices
A
Technical Details
B
WebR - R in the web browser
C
JSLinux terminal
D
webLinux terminal
41
Summary
In summary, this book is a work in progress.
40
Genetic Data in R and GDS
References